Okay I may be doing something wrong here...
Lt. Cmdr. Lowell has a Systems Ops (Helm/Flight Control) of 6, he get's +2 from his Int and +2 from Dog Fighter and another +3 affinity from Space Sciences (Due to the Astrogation Pro Ability) and Skill Focus (Hot Dog) giving him another +4
His total is 17 before any dice are dropped to pilot the ship in a combat situation.
This seems rather intense overall... is there something I am missing?