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Conversely even if you transporter clone a body that doesn't have her memories, the brain must be living, and thus the clone is a new entity, and aware. And that's assuming you could actually alter her transporter trace to wipe the clones mind in the first place. There is no precedent for doing that sort of modification to a transporter trace. Correcting genetic damage, yes. But that's far simpler (technically) than altering memory. And even if you could, the chances of it working first time would not be good. You might have to have several goes, if their skill rolls don't make it. Which would lead to a few 'failed' clones too. Which could be really gross, and perhaps make them rethink their plan. And also raises a lot of different legal and ethical issues too. Starfleet Command would not look favourably on that sort of experimentation. And you PCs could look forward to a long term in rehabilitation, or at least dishonourable discharge.