You already know my mind on this one, PG, but I'll post my thoughts on this for everyone else's benefit.
1. I agree with Ramage in that I don't believe that the Eugenics Wars supermen should be a balanced species. (I do believe, however, that play balance is very important to a game system for player character species.)
2. I think the -2 Prs is too excessive...instead, I'd recommend a -1 Prs and a +1 Vit.
3. I also disagree with the Intolerance and Species Enmity flaws. I feel that there was no support of those flaws on screen; instead I believe that the Eugenics should have an insatiable desire to conquer (which causes them to have difficulty relating to those not under their rule).
4. I personally went with the Physically Fit ability for security officers, vice the Fit edge. And I would also drop the Skilled ability, to push the Eugenics away from humanity a little bit.
Other than my disagreements, PG's writeup is good for a PC-playable Eugenics species. But, then, I believe the Eugenics should be unbalanced (23-25 picks worth), and a major challenge for the PCs.
Davy Jones
"Frightened? My dear, you are looking at a man who has laughed in the face of death, sneered at doom, and chuckled at catastrophe! I was petrified."
-- The Wizard of Oz